Lukas Hermann

Lukas Hermann

M.Sc. Computer Science

University of Freiburg

Biography

Hi, I’m Lukas, and I am a Machine Learning and Cheminformatics Intern at Pangea Bio, where I apply my strong background in machine learning and data science to solve challenging problems in drug discovery and natural product research. I’m passionate about using machine learning to make a positive impact on human life!

Nine years of experience in deep learning, from training reinforcement learning agents on real robots to finetuning a large language model on ethnobotanical data. Currently looking for a job!

Interests
  • Machine Learning
  • Data Science
  • Cheminformatics
  • Large Language Models
  • Robotics
Education
  • M.Sc. in Computer Science, 2019

    University of Freiburg

  • B.Sc. in Computer Science, 2015

    University of Freiburg

News

Skills

Python
C++
Java
Linux
PyTorch_logo_icon
PyTorch
slurm
Slurm
Robot_Operating_System_logo
ROS
numpy
NumPy
Git
opencv
OpenCV
hydra
Hydra
lightning
PyTorch Lightning
scipy
SciPy
pandas
Pandas
sklearn
Scikit-learn
aws
AWS
docker
Docker
rdkit
RDKit

Experience

 
 
 
 
 
Pangea Bio
Machine Learning and Cheminformatics Intern
Feb 2023 – Present Berlin
  • Benchmarking machine learning models and molecular fingerprints for chemical activity prediction using RDKit.
  • Fine‑tuning Llama2 and prompt engineering of LLMs for medical entity and relationship extraction from ethnobotanical literature.
  • Integration of heterogeneous data sources such as ethnobotany, natural product datasets, and bioactivity databases like PubChem and ChEMBL and implementation of analysis workflow to prioritize potential compound‑target pairs.
  • Building docker images and cloud deployment on AWS, Lambda Labs and Vast.ai.
 
 
 
 
 
University of Freiburg, Autonomous Intelligent Systems Lab
PhD Candidate
Feb 2020 – Apr 2022 Freiburg
  • Machine learning research for robot manipulation.
  • Created CALVIN, a benchmark, dataset and state-of-the-art Transformer‑based architecture for learning language‑conditioned robot control policies from unstructured data.
  • Self-supervised learning of robotic skills from demonstrations (HULC).
  • Optimized dataloading and distributed training on high‑performance SLURM cluster.
  • Developed a Python framework for the fast design of platform-independent robot experiments.
  • Implemented robot control on three different robots (KUKA iiwa, Franka Emika Panda, UR3).
 
 
 
 
 
University of Freiburg, Autonomous Intelligent Systems Lab
Research Assistant
Sep 2019 – Jan 2020 Freiburg
  • Designed and implemented curriculum learning strategies for deep reinforcement learning based on Proximal Policy Optimization.
  • Successfully applied the algorithm to solve real‑world robot manipulation tasks with KUKA LBR iiwa (ICRA 2020 paper).
 
 
 
 
 
University of Freiburg, Autonomous Intelligent Systems Lab
Student Research Assistant
Jun 2016 – Aug 2016 Freiburg
Created a dataset of 3D‑reconstructed household objects for robot manipulation (for tracking and training in simulation).
 
 
 
 
 
University of Freiburg, Autonomous Intelligent Systems Lab
Student Research Assistant
Sep 2015 – Nov 2015 Freiburg
Trained a mouth detection for robotics applications.

Education

 
 
 
 
 
University of Freiburg
M.Sc. Computer Science (GPA 4.0)
University of Freiburg
Oct 2015 – Jun 2019 Freiburg

Minor: Cognitive Science

Thesis: Adaptive Curriculum Generation from Demonstrations
Supervised by Prof. Dr. Wolfram Burgard

Specializations:

  • Robotics
  • Machine Learning
  • Computer Vision
 
 
 
 
 
Sapienza University of Rome
Erasmus Semester
Sapienza University of Rome
Sep 2016 – Jan 2017 Rome
 
 
 
 
 
University of Freiburg
B.Sc. Computer Science (GPA 3.8)
University of Freiburg
Oct 2011 – Sep 2015 Freiburg
 
 
 
 
 
Eötvös Loránd University
Erasmus Semester
Eötvös Loránd University
Sep 2013 – Jan 2014 Budapest

Students Supervised

  • Ilia Dobrusin, Self-Supervised Consistency Loss for Sim-to-Real Domain Adaptation, Master Thesis, 2021.
  • Mikel Martinez, Self-supervised Control with Vision and Language, Master Project, 2021.
  • Jessica Borja, Affordance Learning from Play for Sample-Efficient Policy Learning, Master Project, 2021.
  • Deep Learning Lab Course, 2021